Cython bindings and Python interface to the NCBI C++ ToolKit (including BLAST+).
GitHub repository with 11 stars and 0 forks.
Language: Cython
Topics: bioinformatics, blast, cython-library, python-bindings, python-library, sequence-analysis
2026-06-05: 11 stars and 0 forks.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
GitHub repository with 893 stars and 299 forks.
Trending score: 0.29; stars gained: +0; forks gained: +0.
Language: Cython
Topics: bioinformatics, ngs, python, htslib
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
GitHub repository with 893 stars and 299 forks.
Trending score: 0.29; stars gained: +0; forks gained: +0.
Language: Cython
Topics: bioinformatics, ngs, python, htslib
FreeSASA Python Module
GitHub repository with 60 stars and 17 forks.
Trending score: 0.17; stars gained: +0; forks gained: +0.
Language: Cython
Topics: pypi-packages, python, structural-biology
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
GitHub repository with 922 stars and 190 forks.
Trending score: 1.10; stars gained: +10; forks gained: +2.
Language: Python
Topics: ai-agents, bioinformatics, equity, genomics, local-first, openclaw
Conda recipes for the bioconda channel.
GitHub repository with 1,832 stars and 3,956 forks.
Trending score: 0.97; stars gained: +4; forks gained: +1.
Language: Shell
Topics: bioinformatics, conda, package-management, hacktoberfest
List of Computer Science courses with video lectures.
GitHub repository with 81,721 stars and 11,298 forks.
Trending score: 0.87; stars gained: +7; forks gained: +0.
Topics: computer-science, algorithms, systems, databases, machine-learning, web-development
Data intensive science for everyone.
GitHub repository with 1,787 stars and 1,157 forks.
Trending score: 0.80; stars gained: +2; forks gained: +0.
Language: Python
Topics: bioinformatics, dna, genomics, hacktoberfest, ngs, pipeline
A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
GitHub repository with 1,015 stars and 129 forks.
Trending score: 0.77; stars gained: +3; forks gained: +0.
Language: Python
Topics: bioinformatics, omics, bulk-rna-seq, single-cell
A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.
GitHub repository with 33 stars and 10 forks.
Trending score: 0.59; stars gained: +3; forks gained: +0.
Language: Python
Topics: ai-agent, awesome, awesome-list, bioinformatics, biomedical, genomics