snakemake/snakedeploy
deploy a snakemake pipeline directly from version control (under development)
GitHub repository with 25 stars and 13 forks.
Language: Python
Topics: reproducibility, snakemake
deploy a snakemake pipeline directly from version control (under development)
GitHub repository with 25 stars and 13 forks.
Language: Python
Topics: reproducibility, snakemake
2026-06-05: 25 stars and 13 forks.
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
GitHub repository with 922 stars and 190 forks.
Trending score: 1.10; stars gained: +10; forks gained: +2.
Language: Python
Topics: ai-agents, bioinformatics, equity, genomics, local-first, openclaw
Reproducible artifact manifests, sandbox-output verification, and evidence-bundle validation for artifact-heavy workflows.
GitHub repository with 6 stars and 0 forks.
Trending score: 0.07; stars gained: +0; forks gained: +0.
Language: Python
Topics: artifact-verification, audit, binary-analysis, ci, cli, evidence
This is the development home of the workflow management system Snakemake. For general information, see
GitHub repository with 2,796 stars and 648 forks.
Trending score: 0.04; stars gained: +0; forks gained: +0.
Language: Python
Topics: snakemake, reproducibility, workflow-management
Official Code for "SciCoQA: Quality Assurance for Scientific Paper--Code Alignment" https://arxiv.org/abs/2601.12910
GitHub repository with 5 stars and 0 forks.
Trending score: 0.03; stars gained: +0; forks gained: +0.
Language: Python
Topics: agentic-ai, ai-scientist, ai4science, llm, nlp, reproducibility
Tool for encapsulating, running, and reproducing data science projects
GitHub repository with 240 stars and 97 forks.
Trending score: 0.05.
Language: Python
Topics: data, anaconda, conda-environment, reproducibility, datascience, running
The agent that grows with you
GitHub repository with 181,795 stars and 31,192 forks.
Trending score: 5.95; stars gained: +1,867; forks gained: +361.
Language: Python
Topics: ai, ai-agent, ai-agents, anthropic, chatgpt, claude
Compress tool outputs, logs, files, and RAG chunks before they reach the LLM. 60-95% fewer tokens, same answers. Library, proxy, MCP server.
GitHub repository with 13,361 stars and 853 forks.
Trending score: 5.69; stars gained: +2,829; forks gained: +175.
Language: Python
Topics: agent, ai, anthropic, compression, context-engineering, context-window
Academic Research Skills for Claude Code: research → write → review → revise → finalize
GitHub repository with 27,484 stars and 2,256 forks.
Trending score: 5.52; stars gained: +1,079; forks gained: +89.
Language: Python
Topics: academic-pipeline, academic-writing, ai-research, claude, claude-code, literature-review
Learn it. Build it. Ship it for others.
GitHub repository with 28,622 stars and 4,680 forks.
Trending score: 5.32; stars gained: +1,261; forks gained: +238.
Language: Python
Topics: agents, ai, ai-agents, ai-engineering, computer-vision, course
GitHub repository with 30,029 stars and 4,231 forks.
Trending score: 4.88; stars gained: +688; forks gained: +114.
Language: Python
An opinionated list of Python frameworks, libraries, tools, and resources
GitHub repository with 301,371 stars and 28,044 forks.
Trending score: 4.60; stars gained: +518; forks gained: +24.
Language: Python
Topics: awesome, python, collections, python-frameworks, python-libraries, python-tools
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
GitHub repository with 922 stars and 190 forks.
Trending score: 1.10; stars gained: +10; forks gained: +2.
Language: Python
Topics: ai-agents, bioinformatics, equity, genomics, local-first, openclaw
Reproducible artifact manifests, sandbox-output verification, and evidence-bundle validation for artifact-heavy workflows.
GitHub repository with 6 stars and 0 forks.
Trending score: 0.07; stars gained: +0; forks gained: +0.
Language: Python
Topics: artifact-verification, audit, binary-analysis, ci, cli, evidence
Enhance research paper writing by organizing workflows, improving structure, and supporting self-review for clear, logical, and well-aligned content.
GitHub repository with 6 stars and 0 forks.
Trending score: 0.05; stars gained: +0; forks gained: +0.
Topics: academic-writing, agent, agentic-ai, ai-agents, citation-verification, literature-review
This is the development home of the workflow management system Snakemake. For general information, see
GitHub repository with 2,796 stars and 648 forks.
Trending score: 0.04; stars gained: +0; forks gained: +0.
Language: Python
Topics: snakemake, reproducibility, workflow-management
Official Code for "SciCoQA: Quality Assurance for Scientific Paper--Code Alignment" https://arxiv.org/abs/2601.12910
GitHub repository with 5 stars and 0 forks.
Trending score: 0.03; stars gained: +0; forks gained: +0.
Language: Python
Topics: agentic-ai, ai-scientist, ai4science, llm, nlp, reproducibility
Tool for encapsulating, running, and reproducing data science projects
GitHub repository with 240 stars and 97 forks.
Trending score: 0.05.
Language: Python
Topics: data, anaconda, conda-environment, reproducibility, datascience, running