nextstrain/cli

The Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Auspice across computing environments such as Docker, Conda, and AWS Batch.

GitHub repository with 28 stars and 20 forks.

Language: Python

Open provider repository

Latest metric snapshot

2026-06-05: 28 stars and 20 forks.

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