natera-open-source/vep-rs

A fast, memory-efficient variant effect predictor written in Rust: a from-scratch reimplementation of the Ensembl Variant Effect Predictor (VEP) that takes the same inputs and flags, emits VEP's consequence vocabulary in VEP's output formats, and annotates population-scale callsets two orders of magnitude faster than the Perl implementation.

GitHub repository with 24 stars and 3 forks.

Language: Rust

Topics: bioinformatics, ensembl-vep, genomics, rust, variant-annotation, variant-effect-predictor, vcf

Open provider repository

24h trend summary

Trending score 0.60, freshness score 0.95, stars gained +2, forks gained +0.

Latest metric snapshot

2026-10-02: 24 stars and 3 forks.

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