BIMSBbioinfo/pigx_bsseq
bisulfite sequencing pipeline from fastq to methylation reports
GitHub repository with 13 stars and 4 forks.
Language: Python
Topics: bioinformatics, guix, pipeline, reproducibility, snakemake
bisulfite sequencing pipeline from fastq to methylation reports
GitHub repository with 13 stars and 4 forks.
Language: Python
Topics: bioinformatics, guix, pipeline, reproducibility, snakemake
2026-06-05: 13 stars and 4 forks.
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
GitHub repository with 923 stars and 191 forks.
Trending score: 1.10; stars gained: +10; forks gained: +2.
Language: Python
Topics: ai-agents, bioinformatics, equity, genomics, local-first, openclaw
A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.
GitHub repository with 34 stars and 10 forks.
Trending score: 0.59; stars gained: +3; forks gained: +0.
Language: Python
Topics: ai-agent, awesome, awesome-list, bioinformatics, biomedical, genomics
Drop-in scientific plotting skill for Claude Code, Codex, Cursor, and other coding agents.
GitHub repository with 126 stars and 1 forks.
Trending score: 0.35; stars gained: +1; forks gained: +0.
Language: Python
Topics: agent-tools, ai-agent, bioinformatics, cell-style, data-visualization, ggplot2
rapids-singlecell: GPU-accelerated framework for scRNA analysis
GitHub repository with 374 stars and 46 forks.
Trending score: 0.32; stars gained: +1; forks gained: +0.
Language: Python
Topics: anndata, bioinformatics, gpu, scverse, single-cell
Cloud-native genomic dataframes and batch computing
GitHub repository with 1,064 stars and 267 forks.
Trending score: 0.32; stars gained: +1; forks gained: +0.
Language: Python
Topics: bioinformatics, genetics, genomics, gwas, hail, python
Annotated data.
GitHub repository with 748 stars and 196 forks.
Trending score: 0.28; stars gained: +0; forks gained: +0.
Language: Python
Topics: scanpy, data-science, transcriptomics, bioinformatics, machine-learning, scverse
The agent that grows with you
GitHub repository with 182,737 stars and 31,332 forks.
Trending score: 5.95; stars gained: +1,867; forks gained: +361.
Language: Python
Topics: ai, ai-agent, ai-agents, anthropic, chatgpt, claude
Academic Research Skills for Claude Code: research → write → review → revise → finalize
GitHub repository with 27,643 stars and 2,276 forks.
Trending score: 5.52; stars gained: +1,079; forks gained: +89.
Language: Python
Topics: academic-pipeline, academic-writing, ai-research, claude, claude-code, literature-review
Learn it. Build it. Ship it for others.
GitHub repository with 28,771 stars and 4,705 forks.
Trending score: 5.32; stars gained: +1,261; forks gained: +238.
Language: Python
Topics: agents, ai, ai-agents, ai-engineering, computer-vision, course
An opinionated list of Python frameworks, libraries, tools, and resources
GitHub repository with 301,459 stars and 28,045 forks.
Trending score: 4.60; stars gained: +518; forks gained: +24.
Language: Python
Topics: awesome, python, collections, python-frameworks, python-libraries, python-tools
Use claude-code for free in the terminal, VSCode extension or discord like OpenClaw (voice supported)
GitHub repository with 32,561 stars and 4,946 forks.
Trending score: 4.56; stars gained: +467; forks gained: +82.
Language: Python
The agent engineering platform.
GitHub repository with 138,601 stars and 22,962 forks.
Trending score: 4.53; stars gained: +171; forks gained: +31.
Language: Python
Topics: ai, anthropic, gemini, langchain, llm, openai
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
GitHub repository with 923 stars and 191 forks.
Trending score: 1.10; stars gained: +10; forks gained: +2.
Language: Python
Topics: ai-agents, bioinformatics, equity, genomics, local-first, openclaw
Conda recipes for the bioconda channel.
GitHub repository with 1,831 stars and 3,955 forks.
Trending score: 0.97; stars gained: +4; forks gained: +1.
Language: Shell
Topics: bioinformatics, conda, hacktoberfest, package-management
List of Computer Science courses with video lectures.
GitHub repository with 81,728 stars and 11,299 forks.
Trending score: 0.87; stars gained: +7; forks gained: +0.
Topics: computer-science, algorithms, systems, databases, machine-learning, web-development
A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.
GitHub repository with 34 stars and 10 forks.
Trending score: 0.59; stars gained: +3; forks gained: +0.
Language: Python
Topics: ai-agent, awesome, awesome-list, bioinformatics, biomedical, genomics
An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
GitHub repository with 57 stars and 7 forks.
Trending score: 0.40; stars gained: +1; forks gained: +0.
Language: MDX
Topics: bioinformatics, data-sharing, public-health, sequencing-data, virus-evolution, virus-sequences
Drop-in scientific plotting skill for Claude Code, Codex, Cursor, and other coding agents.
GitHub repository with 126 stars and 1 forks.
Trending score: 0.35; stars gained: +1; forks gained: +0.
Language: Python
Topics: agent-tools, ai-agent, bioinformatics, cell-style, data-visualization, ggplot2