R repositories

Discover trending R repositories ranked by recent growth and activity.

  1. 1. mengxu98/scop

    An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.

    GitHub repository with 254 stars and 31 forks.

    Trending score: 0.57; stars gained: +2; forks gained: +0.

    Language: R

  2. 2. prisma-flowdiagram/PRISMA2020

    Produce PRISMA-2020 compliant flow diagrams

    GitHub repository with 275 stars and 115 forks.

    Trending score: 0.49; stars gained: +2; forks gained: +0.

    Language: R

    Topics: prisma, review, systematic, visualization, meta-analysis, reporting

  3. 3. r-lib/cli

    Tools for making beautiful & useful command line interfaces

    GitHub repository with 711 stars and 85 forks.

    Trending score: 0.37; stars gained: +1; forks gained: +0.

    Language: R

    Topics: r, cli

  4. 4. ropensci/rgbif

    Interface to the Global Biodiversity Information Facility API

    GitHub repository with 177 stars and 52 forks.

    Trending score: 0.07; stars gained: +0; forks gained: +0.

    Language: R

    Topics: gbif, api, data, biodiversity, species, rstats

  5. 5. xia-lab/MetaboAnalystR

    R package for MetaboAnalyst

    GitHub repository with 397 stars and 169 forks.

    Trending score: 0.25; stars gained: +0; forks gained: +0.

    Language: R

  6. 6. Appsilon/rhino

    Build high quality, enterprise-grade Shiny apps at speed

    GitHub repository with 330 stars and 24 forks.

    Trending score: 0.25; stars gained: +0; forks gained: +0.

    Language: R

    Topics: r, shiny, rhinoverse

  7. 7. wranglezone/tibblify

    Rectangle Nested Lists

    GitHub repository with 74 stars and 2 forks.

    Trending score: 0.23; stars gained: +0; forks gained: +0.

    Language: R

  8. 8. KlausVigo/phangorn

    Phylogenetic analysis in R

    GitHub repository with 214 stars and 41 forks.

    Trending score: 0.04; stars gained: +0; forks gained: +0.

    Language: R

    Topics: r, phylogenetic-analysis, phylogenetics, r-package, rstats

  9. 9. rundel/ghclass

    Tools for managing classroom organizations

    GitHub repository with 147 stars and 22 forks.

    Trending score: 0.20; stars gained: +0; forks gained: +0.

    Language: R

  10. 10. ropensci/tinkr

    Convert (R)Markdown files to XML, edit them, write them back as (R)Markdown

    GitHub repository with 62 stars and 7 forks.

    Trending score: 0.18; stars gained: +0; forks gained: +0.

    Language: R

    Topics: r, r-package, rstats, xpath, commonmark, xml

  11. 11. enormandeau/stacks_workflow

    RADseq workflow using STACKS

    GitHub repository with 61 stars and 27 forks.

    Trending score: 0.05; stars gained: +0; forks gained: +0.

    Language: R

    Topics: gbs, genomics, stacks

  12. 12. TheEconomist/the-economist-war-fire-model

    Source code and data for The Economist's Ukraine war-fire model

    GitHub repository with 276 stars and 30 forks.

    Trending score: 0.05; stars gained: +0; forks gained: +0.

    Language: R

  13. 13. scttfrdmn/starburst

    Seamless AWS Cloud Bursting for Parallel R Workloads

    GitHub repository with 11 stars and 1 forks.

    Trending score: 0.16; stars gained: +0; forks gained: +0.

    Language: R

  14. 14. xia-lab/MicrobiomeAnalystR

    A companion R package for the MicrobiomeAnalyst web server

    GitHub repository with 132 stars and 40 forks.

    Trending score: 0.11; stars gained: +0; forks gained: +0.

    Language: R

  15. 15. lukakoning/shinyOAuth

    R package to add OAuth 2.0/OIDC authorization/authentication to Shiny applications

    GitHub repository with 28 stars and 0 forks.

    Trending score: 0.09; stars gained: +0; forks gained: +0.

    Language: R

  16. 16. theGreatWhiteShark/climex

    Extreme value analysis on climatic time series using R and Shiny

    GitHub repository with 10 stars and 4 forks.

    Trending score: 0.09; stars gained: +0; forks gained: +0.

    Language: R

    Topics: gev, climate, gpd, extremes, shiny, dwd

  17. 17. hrbrmstr/Rforecastio

    :cloud: Simple R interface to forecast.io weather data

    GitHub repository with 37 stars and 15 forks.

    Trending score: 0.07; stars gained: +0; forks gained: +0.

    Language: R

  18. 18. zonination/perceptions

    Perceptions of Probability and Numbers

    GitHub repository with 854 stars and 96 forks.

    Trending score: 0.06; stars gained: +0; forks gained: +0.

    Language: R

  19. 19. guyabel/chord-uefa-ec

    Visualizing bilateral links between Euro squads and players clubs

    GitHub repository with 29 stars and 8 forks.

    Trending score: 0.06; stars gained: +0; forks gained: +0.

    Language: R

  20. 20. michbur/dpcR

    Analysis, visualisation and simulation of digital PCR experiments.

    GitHub repository with 9 stars and 3 forks.

    Trending score: 0.06; stars gained: +0; forks gained: +0.

    Language: R

  21. 21. wenje-ma/2026spring

    GitHub repository with 5 stars and 1 forks.

    Trending score: 0.05; stars gained: +0; forks gained: +0.

    Language: R

  22. 22. JamesHWade/shinymcp

    Convert Shiny Apps to MCP Apps

    GitHub repository with 30 stars and 4 forks.

    Trending score: 0.04; stars gained: +0; forks gained: +0.

    Language: R

  23. 23. nflverse/nfldata

    NFL Data (by Lee Sharpe)

    GitHub repository with 336 stars and 81 forks.

    Trending score: 0.15; stars gained: +0; forks gained: +0.

    Language: R

  24. 24. jolars/eulerr

    Area-Proportional Euler and Venn Diagrams with Ellipses

    GitHub repository with 143 stars and 20 forks.

    Trending score: 0.22; stars gained: +0; forks gained: +0.

    Language: R

    Topics: r, euler-diagram, venn-diagram